MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5031|JADGMG010000005.1
SEQF5031_02586
Genome Viewer
NA
AA
1266/422
1852-587
L-threonine dehydratase biosynthetic IlvA
SEQF5031|JADGMG010000005.1
SEQF5031_02587
Genome Viewer
NA
AA
570/190
2436-1867
3-isopropylmalate dehydratase small subunit
SEQF5031|JADGMG010000005.1
SEQF5031_02588
Genome Viewer
NA
AA
1374/458
3810-2437
3-isopropylmalate dehydratase large subunit
SEQF5031|JADGMG010000005.1
SEQF5031_02589
Genome Viewer
NA
AA
1041/347
4866-3826
3-isopropylmalate dehydrogenase
SEQF5031|JADGMG010000005.1
SEQF5031_02590
Genome Viewer
NA
AA
1533/511
6395-4863
2-isopropylmalate synthase
SEQF5031|JADGMG010000005.1
SEQF5031_02591
Genome Viewer
NA
AA
1008/336
7432-6425
Ketol-acid reductoisomerase (NADP(+))
SEQF5031|JADGMG010000005.1
SEQF5031_02592
Genome Viewer
NA
AA
474/158
7940-7467
Acetolactate synthase small subunit
SEQF5031|JADGMG010000005.1
SEQF5031_02593
Genome Viewer
NA
AA
1734/578
9673-7940
Acetolactate synthase large subunit
SEQF5031|JADGMG010000005.1
SEQF5031_02594
Genome Viewer
NA
AA
1689/563
11374-9686
Dihydroxy-acid dehydratase
SEQF5031|JADGMG010000005.1
SEQF5031_02595
Genome Viewer
NA
AA
90/30
11574-11485
hypothetical protein
SEQF5031|JADGMG010000005.1
SEQF5031_02596
Genome Viewer
NA
AA
462/154
11820-12281
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
SEQF5031|JADGMG010000005.1
SEQF5031_02597
Genome Viewer
NA
AA
669/223
12259-12927
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
SEQF5031|JADGMG010000005.1
SEQF5031_02598
Genome Viewer
NA
AA
468/156
12900-13367
[Ribosomal protein S18]-alanine N-acetyltransferase
SEQF5031|JADGMG010000005.1
SEQF5031_02599
Genome Viewer
NA
AA
1014/338
13360-14373
tRNA N6-adenosine threonylcarbamoyltransferase
SEQF5031|JADGMG010000005.1
SEQF5031_02600
Genome Viewer
NA
AA
429/143
14450-14878
hypothetical protein
SEQF5031|JADGMG010000005.1
SEQF5031_02601
Genome Viewer
NA
AA
144/48
15188-15045
hypothetical protein
SEQF5031|JADGMG010000005.1
SEQF5031_02602
Genome Viewer
NA
AA
1923/641
17613-15691
putative ABC transporter ATP-binding protein YheS
SEQF5031|JADGMG010000005.1
SEQF5031_02603
Genome Viewer
NA
AA
633/211
17776-18408
Redox-sensing transcriptional repressor Rex
SEQF5031|JADGMG010000005.1
SEQF5031_02604
Genome Viewer
NA
AA
225/75
18420-18644
Sec-independent protein translocase protein TatA
SEQF5031|JADGMG010000005.1
SEQF5031_02605
Genome Viewer
NA
AA
780/260
18719-19498
Sec-independent protein translocase protein TatCy
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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